Insertion junction: CLIP2.068657_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068657
Chromosome:chromosome 4
Location:1361075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214502 UGE,DIV113,UGE1,EZY4 (1 of 1) 5.1.3.2//5.1.3.5 - UDP-glucose 4-epimerase / Uridine diphospho-galactose-4-epimerase // UDP-arabinose 4-epimerase; UDP-D-glucose/UDP-D-galactose 4-epimerase 5 5'UTR
Cre04.g214503 (1 of 1) K02951 - small subunit ribosomal protein S12e (RP-S12e, RPS12) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATTCTCCAGTTAACTTCTTCTGCGGACCCCCATCGCGGTCGCCCCCAT
Internal bar code:TAAATCGCCACATTTACTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2023
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTTTGTCAGTGTCTCCC
Suggested primer 2:GCGAACCATATGCACGCAAT