Insertion junction: CLIP2.068660_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068660
Chromosome:chromosome 16
Location:1642275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654400 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGCTCGGCCCATGGGTTTATCTGTCTCTCGGGGGACACACGACGGC
Internal bar code:TGTATACGTCATCGTAGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2240
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAGATTCGGAGGTTGT
Suggested primer 2:GCAGCTGCAGTGAAGACAAC