Insertion junction: CLIP2.068663_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068663
Chromosome:chromosome 13
Location:4317462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592551 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGCTGATATCCCAGTAAATGAAGCTGTGGGCACTGCAGCCGTTGCTG
Internal bar code:TTGGATTACTGTTAAATGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTCGCTTGTGTTGAGC
Suggested primer 2:GTCGCCAGTGTTCAAACCAC