Insertion junction: CLIP2.068666_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068666
Chromosome:chromosome 9
Location:50638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386143 (1 of 2) 1.14.11.4 - Procollagen-lysine 5-dioxygenase / Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGTAGACCAGAGCGGGGGTCTGGCAATTTGTTTTCTCCCCCCTGAGC
Internal bar code:GCTGAAATGTACAGGTATGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:544
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGTCGTAAGTAGGCCAT
Suggested primer 2:TTCTCCCTCTCTCTCCAGCC