Insertion junction: CLIP2.068667_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068667
Chromosome:chromosome 4
Location:2676482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223200 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAACTCAAACGCTCAAGATCATCCGCATGTTCCCTGCATCGGCATGC
Internal bar code:GCAGCTTTAAATCTGAACGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2164
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTTTGGCTGGCTTTTA
Suggested primer 2:GTAGCGTCTCCGTGCTAGAC