Insertion junction: CLIP2.068669_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068669
Chromosome:chromosome 16
Location:4908255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686800 PTA2 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain; Proton/phosphate symporter, splice variant b 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATTGGATCCTGGACTAGCCATGGGCACCAGGCACGACTTCCTTAGT
Internal bar code:TTTGTAATTGGTACACGCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGACGGTTGGTGTTTCC
Suggested primer 2:TGGGCACTCTGTATGCAAGG