Insertion junction: CLIP2.068670_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068670
Chromosome:chromosome 9
Location:5248649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407100 MRPS5,uS5m Mitochondrial ribosomal protein S5; (1 of 1) PTHR13718:SF61 - 28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACTCCACGAATGTCCGCCGCCAGCCCGCAAACACGTATGGACGTCC
Internal bar code:TCGAGGGGATTTTACGTGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCCAACGAAGGGGTAGG
Suggested primer 2:ATGACAGGTCCAGCTCTTGC