Insertion junction: CLIP2.068670_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068670
Chromosome:chromosome 9
Location:5248654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407100 MRPS5,uS5m Mitochondrial ribosomal protein S5; (1 of 1) PTHR13718:SF61 - 28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGGGTGGCACGGCAGAGAGGCAGTGACACAGAGCTTCTTGGGTGAGC
Internal bar code:GAGCTCTGCAAGAATTTCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:663
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACAGGTCCAGCTCTTGC
Suggested primer 2:AATGCCAACGAAGGGGTAGG