Insertion junction: CLIP2.068681_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068681
Chromosome:chromosome 13
Location:1373511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571700 CDPK9 (1 of 1) PF00069//PF07714//PF13499 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCAAAAGCGCGCGCACATCCGCACATATAGGAAGCACCGCCCAGCG
Internal bar code:CATTTCGAGAATAAGCGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATCCATTGAGCTTGCGC
Suggested primer 2:ATGACAGGGGCGCAATTACA