Insertion junction: CLIP2.068683_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068683
Chromosome:chromosome 9
Location:3112073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394139 3'UTR
Cre09.g394176 (1 of 21) IPR000679 - Zinc finger, GATA-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGCTTAAATCAAGCGCCGAGTGAAGTCAACCGCAGTTCGCCACGTTC
Internal bar code:GGCAGAAATAACGTTTGTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1960
LEAP-Seq percent confirming:91.25
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGTTCCGCAACACTCGT
Suggested primer 2:TGGAGCCAACCAAATTTGCG