Insertion junction: CLIP2.068683_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068683
Chromosome:chromosome 9
Location:3112079
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394139 3'UTR
Cre09.g394176 (1 of 21) IPR000679 - Zinc finger, GATA-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCGGGGGTGCCAATTTCCGCTGCAGCTCAGCATTGCACAATTTGCGT
Internal bar code:AGTTGAGAGGCTTTATGCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGCCAACCAAATTTGCG
Suggested primer 2:ATGAGTTCCGCAACACTCGT