Insertion junction: CLIP2.068684_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068684
Chromosome:chromosome 17
Location:2107743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802047 (1 of 14) IPR002156//IPR012337 - Ribonuclease H domain // Ribonuclease H-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGACTTTAATTGACTGGCGACTGTGGCGACTCGTTGCGAGGTAAAGG
Internal bar code:GAGCAGCTTCTCGTTGTTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1332
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCGTCCACGTACACCAC
Suggested primer 2:AAGATCTCCACCCCCTCCTC