Insertion junction: CLIP2.068694_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068694
Chromosome:chromosome 3
Location:1751651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153600 (1 of 1) IPR000104//IPR003034//IPR022656 - Antifreeze protein, type I // SAP domain // XPA C- terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGATGGCCCCAGTCACTCCGAGCGCAAGGCATTCATTGGTGGAGTA
Internal bar code:TGTTTCTGCTAGGTTTAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1595
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCACACGTGTCATGCGTA
Suggested primer 2:GAGTGTGGTGTTCGTTTGGC