Insertion junction: CLIP2.068694_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068694
Chromosome:chromosome 3
Location:1751653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153600 (1 of 1) IPR000104//IPR003034//IPR022656 - Antifreeze protein, type I // SAP domain // XPA C- terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCACTAAGCTGCTCACCTCTCAACTTGGGGTGACCCACACAGCCGCA
Internal bar code:TGTTTCTGCTAGGTTTAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3396
LEAP-Seq percent confirming:97.1698
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGGTGTTCGTTTGGC
Suggested primer 2:TGTCACACGTGTCATGCGTA