Insertion junction: CLIP2.068700_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068700
Chromosome:chromosome 2
Location:636777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077650 (1 of 2) IPR000340//IPR000387//IPR029021 - Dual specificity phosphatase, catalytic domain // Tyrosine specific protein phosphatases domain // Protein-tyrosine phosphatase-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGACAAAGGTGTTCCCAGGCAAAGTTGCATCGACTGTCGCGGAACAC
Internal bar code:GATGCACGGTGTTCACCCCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3207
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTGTCGCACTTATGGT
Suggested primer 2:ATAGCCCCTGACTCAGACGT