Insertion junction: CLIP2.068706_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068706
Chromosome:chromosome 15
Location:640238
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g636896 (1 of 1) PTHR11082//PTHR11082:SF29 - TRNA-DIHYDROURIDINE SYNTHASE // TRNA-DIHYDROURIDINE SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTGGGCCCTGGCCCTTGCTCTCCCCCATCCCAACGTAGCTATGTCAT
Internal bar code:GTTAAACTTAGGTCAAGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGGTGGGTGTGTGGTTT
Suggested primer 2:ATGGTGCAGGTGTCACGTAG