Insertion junction: CLIP2.068707_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068707
Chromosome:chromosome 6
Location:4654189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278350 AGD1 (1 of 1) 1.3.1.78 - Arogenate dehydrogenase (NADP(+)) / TyrAAT2; Arogenate/prephenate dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCCTGTTAATAGCCCCACTCGCACGCTCACATCCACACACTGCGGC
Internal bar code:CCCTCGGTGTTATCAGGTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1400
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGAAGGTCCGCATTGGG
Suggested primer 2:GGGACCGTACGATGCAGTAG