Insertion junction: CLIP2.068709_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068709
Chromosome:chromosome 6
Location:3680025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278149 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAACTCAGGAGGGCGCCGCGCGAGGGTGATGCAGCCGGCGGATGGTGG
Internal bar code:TAGGGAAGTTTTACCGGAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1024
LEAP-Seq percent confirming:34.7826
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGTCCATGGACTCACG
Suggested primer 2:ATGCTGAAGCGTGACCTTGA