Insertion junction: CLIP2.068710_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068710
Chromosome:chromosome 3
Location:6960410
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g800373 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCCCGCCCTGGATGCAGTTGTGGATGAGCTGCAGACTGCGTTCATC
Internal bar code:ACCAGGGTAGAAATCGGCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2958
LEAP-Seq percent confirming:32.8358
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAAGGACGTCAGTGGCTG
Suggested primer 2:CTGTGCCAATGCCTTTGCTT