Insertion junction: CLIP2.068718_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068718
Chromosome:plastome
Location:202164
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCTCCTTCGGAGTATATAAATATCCCGAAGGGGAAGGAGGCAGTGGT
Internal bar code:CTAATTGTCGTAGTACGTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TATCGAGCAGCCCCGAAAAG
Suggested primer 2:ACGCGTACACAACCCTTGAT