Insertion junction: CLIP2.068723_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068723
Chromosome:chromosome 17
Location:921005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702800 3'UTR
Cre17.g802030 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAATGCAAAACTGACGGGCTGAACGTAAGGAGGTAAGAAGTCGCCTAC
Internal bar code:GATTTAACACCTCTATAGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1078
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCTTGATTGGACAGCAT
Suggested primer 2:TGTAGCAAGCAAGGGATGGG