Insertion junction: CLIP2.068730_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068730
Chromosome:chromosome 4
Location:2514332
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g222300 SRS3 (1 of 1) PTHR12323//PTHR12323:SF0 - SR-RELATED CTD ASSOCIATED FACTOR 6 // CALCIUM HOMEOSTASIS ENDOPLASMIC RETICULUM PROTEIN; putative RNA-binding protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAACATCGTACAGTCCCCCCATATCGCACATCCCCTCATCGCACATTC
Internal bar code:TAAGTTGGTAGATGGTGCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:529
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACACACAGACACACAC
Suggested primer 2:CACGCAATGAATAGGCCAGC