Insertion junction: CLIP2.068733_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068733
Chromosome:chromosome 6
Location:4682495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278700 Conserved Ankyrin-Repeat Protein; (1 of 1) PTHR24193:SF69 - IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574 HOMOLOG-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTCTATTGACATGTGTTGCGGAACTAATGCGTACGTAGACCAGAGCG
Internal bar code:ATAGCATCTGGTGGCGCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1564
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGGAAGTGCCTTTGTG
Suggested primer 2:GTGCTGTGTGTGAGAGACGA