Insertion junction: CLIP2.068736_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068736
Chromosome:chromosome 6
Location:1922373
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g264400 (1 of 1) PTHR13992:SF7 - SMRTER, ISOFORM G CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGCGGCGGCAGACTCGCGCCCGGCGCGGACGGCGGCGGCTGCGCC
Internal bar code:AATTGACCATTTCTACACTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1161
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGCACTGTGTTTGCATG
Suggested primer 2:CGATGACAGAGGAGCCTGAC