Insertion junction: CLIP2.068742_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068742
Chromosome:chromosome 12
Location:4018847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516100 (1 of 1) PF04061 - ORMDL family (ORMDL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACTGCTGGTTGTGCAGTTGACTGAATTAGTAAGGACAGGCGATGCGT
Internal bar code:AAATGGTCGTTATCTCTAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1300
LEAP-Seq percent confirming:65.7143
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTAGCACGCATAGAAGG
Suggested primer 2:CTCCTTCACTGGCTCAAGGG