Insertion junction: CLIP2.068744_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068744
Chromosome:chromosome 17
Location:1699526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708100 (1 of 3) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase; Similar to Hypoxanthine-Guanine outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCTAGAAGAAAGATAATACACATGGCTTAGTGAGCCAGTAAAACATT
Internal bar code:TTTATCATTGGTCGATACGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3442
LEAP-Seq percent confirming:95.082
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGTACATGCGGTTCGGT
Suggested primer 2:ATCTTTCCTCACTGGTGCCG