Insertion junction: CLIP2.068744_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068744
Chromosome:chromosome 17
Location:1699530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708100 (1 of 3) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase; Similar to Hypoxanthine-Guanine outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGAGCAAGCTCAGGCGGCGTGAACGGTTGCTTGTTTCCATGTCTGAA
Internal bar code:GGCCGCTTCAAGGCCCATGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2559
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTTCCTCACTGGTGCCG
Suggested primer 2:AGTTGTACATGCGGTTCGGT