Insertion junction: CLIP2.068746_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068746
Chromosome:chromosome 2
Location:2167063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089350 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR_intron
Cre02.g089400 HRP2 (1 of 12) 2.7.11.18 - [Myosin light-chain] kinase / Smooth-muscle-myosin-light-chain kinase; Hydroxyproline-rich glycoprotein 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAGCAACCCGCTGACGCGACCCATGCATGCCTGATGCCTAATGTGGAT
Internal bar code:CTAACTTTTATGTGGCTGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GACGACGACGACGATGATGA
Suggested primer 2:TCCATGCACACACTGGATCC