Insertion junction: CLIP2.068756_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068756
Chromosome:chromosome 9
Location:6387340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACCGCCCCGTGCCACTCATCCCTCGGGAGGGAAACTACCTGAGACCG
Internal bar code:AAAGGATAAGTGGTAGGTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:45.9459
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCCTAGGAGTCAAGCAT
Suggested primer 2:CCTTTCCCAAAACTTCGGCG