Insertion junction: CLIP2.068756_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068756
Chromosome:chromosome 9
Location:6387471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCTGGAATGTTACGTCAGGCTAGCACCCGGCGCTATGGCCGTAAGTC
Internal bar code:TATTCAGAGCTTGCGTGTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5848
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTCCCAAAACTTCGGCG
Suggested primer 2:CACGCCTAGGAGTCAAGCAT