Insertion junction: CLIP2.068768_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068768
Chromosome:chromosome 6
Location:4833472
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g280200 (1 of 1) PTHR15141//PTHR15141:SF53 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // PROTEIN T23E1.3, ISOFORM A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGAGTTTGAGCACCCACCGGCTTTCCTCCGCGGACAACTCGCCGCATG
Internal bar code:AACTATAGCTCGGGTAACTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCAGGTGGGTTTAAGCC
Suggested primer 2:CGAGCCTTAAATGTGTCGCG