Insertion junction: CLIP2.068770_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068770
Chromosome:chromosome 13
Location:5171973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607300 FAP352,MAPK5 (1 of 1) K08293 - mitogen-activated protein kinase [EC:2.7.11.24] (E2.7.11.24); Flagellar Associated Protein 352 3'UTR
Cre13.g607350 CAH7 (1 of 2) PTHR11002:SF13 - BETA CARBONIC ANHYDRASE 1; Carbonic anhydrase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGCCGTTTACTAGCTGCTGCTGTCCTACGCATCGTAGATATGCTCCG
Internal bar code:TTTGCGTTCTTTTTCGCGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1113
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTTGCGCCTAGATGGTT
Suggested primer 2:TGAGGATGAGAGGGAGGTGG