Insertion junction: CLIP2.068771_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068771
Chromosome:chromosome 7
Location:2052934
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g325812 MAW1,ZYS2 Membrane-associated hydroxyproline-rich glycoprotein 1; (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGCCGCCGCAGCCTCCGTCTCCGCCACCTGAGCCCCCGGCGCCGCCT
Internal bar code:GGTATCTATACCCGCTCCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:3.125
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACTACCAGCCTGCCAGC
Suggested primer 2:AGCTACAACGTGCAGATGCT