Insertion junction: CLIP2.068772_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068772
Chromosome:chromosome 3
Location:4324660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800330 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGTGAACAGCGGAAGTTGCTTGACCCATGTTGATTCTGGTAGTGTGT
Internal bar code:CCACTAAGACACCGCAATGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1004
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCAAACTTAGCCGTATG
Suggested primer 2:CCTGTCACTTGTGTGCAACG