Insertion junction: CLIP2.068782_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068782
Chromosome:chromosome 5
Location:159374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242550 RSP6,PF26 Radial spoke protein 6; (1 of 2) PF04712 - Radial spokehead-like protein (Radial_spoke) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGATATTCAAGGCAAGGAAAAGCTGCTGGTTTATATTCCTGTTGCAAA
Internal bar code:GGTCCTTTTTGGAAGTGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1808
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGACCGTGAGAAGTGCAC
Suggested primer 2:GCTACTCCTCAGAGGACCCA