Insertion junction: CLIP2.068801_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068801
Chromosome:chromosome 17
Location:685554
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g700550 (1 of 2) IPR000210//IPR008974//IPR011333 - BTB/POZ domain // TRAF-like // POZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCGATTTCTGCTTCTAAGCCGCGCTGGCCTGAGCCTGATGCTACCA
Internal bar code:GATACATCTAACGATGTTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1244
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTACCAGCTGCAAGTGA
Suggested primer 2:CCTCCAGCTCCTCCACAAAG