Insertion junction: CLIP2.068804_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068804
Chromosome:chromosome 1
Location:4457373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030450 (1 of 1) IPR006615//IPR028881//IPR028889//IPR029071 - Peptidase C19, ubiquitin-specific peptidase, DUSP domain // PAN2 domain // Ubiquitin specific protease domain // Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCAGCACCCACATGTTGCGGTGGCGCAACATGTGGGTCTCCTGTAG
Internal bar code:AGGGATATCGTAAGCGTTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4384
LEAP-Seq percent confirming:93.0556
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACACGCGCCATAGCTTA
Suggested primer 2:TTGCTTGCATGACATGGTGC