Insertion junction: CLIP2.068808_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068808
Chromosome:chromosome 3
Location:8171056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTTGTGCCCGCCAAACTCAATCGCGGGGCCCCGCTAAACCCTAGGTG
Internal bar code:TTACCACTAGAACGGATTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2364
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCGAATGTCTCTGCGAA
Suggested primer 2:CCCTTACGACGTTCCAGCTT