Insertion junction: CLIP2.068811_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068811
Chromosome:chromosome 2
Location:5023944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110850 (1 of 8) IPR000719//IPR001245//IPR011009 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTGTGGGGACGCCGCGTTGGCAAGAGCCACGGATGGCCTACCATGA
Internal bar code:ATCGATATCTTATGGTAATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1323
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TATCACGCTGTATGACGCCC
Suggested primer 2:GCATTGCAATGAAAGGGGCA