Insertion junction: CLIP2.068813_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068813
Chromosome:chromosome 17
Location:563484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699550 (1 of 37) IPR008979 - Galactose-binding domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCACGTACCACCGCGACCCTTCGACAGACTCTCACCGGCCTGAATCTT
Internal bar code:GACTATTACTGGACGATACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCTCCATCGTAGATGAA
Suggested primer 2:ACTCCCGCTTTCTGATGGTG