Insertion junction: CLIP2.068815_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068815
Chromosome:chromosome 1
Location:3482081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGGCGCAACCCTGAAAATCGGTTTAAGCAGAAATGACACGGTCAAT
Internal bar code:GTATTATCAAACGGGGGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTTGATGCGTTGCACA
Suggested primer 2:TTCCGGAACCTACCCAATGC