Insertion junction: CLIP2.068824_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068824
Chromosome:chromosome 7
Location:4877392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346350 (1 of 2) PTHR10174//PTHR10174:SF113 - RETINALDEHYDE BINDING PROTEIN-RELATED // RETINALDEHYDE-BINDING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTGCGGGGTTGCGCTGCGTGCGTTCGTTCGTATGTGAAACGGCCGT
Internal bar code:GTAGTCGCTTTTTGCGGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2309
LEAP-Seq percent confirming:94.8276
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCTTTCAAGCCTCCAGC
Suggested primer 2:CCCATGACGACCCATGTTGA