Insertion junction: CLIP2.068833_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068833
Chromosome:chromosome 11
Location:2198457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467725 5'UTR
Cre11.g467726 (1 of 1) K06316 - oligosaccharide translocation protein RFT1 (RFT1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTGTGATAAACACCTTTTGGTTTGCCTCGCGACGAGTCTCTGTGGCG
Internal bar code:CACGACGTAACGTTACGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:702
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATCAGCATAGGGGCCTG
Suggested primer 2:ACGTTAGCGCAGAGTTGTCA