Insertion junction: CLIP2.068835_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068835
Chromosome:chromosome 16
Location:6219290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676600 (1 of 4) IPR029041 - FAD-linked oxidoreductase-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAAAATAGAGCGCGTTGCTAGGCCACAGCGTTAATACATGTCGCCATA
Internal bar code:GATTCCCGGAGCTTAAACCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2320
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCAATCTGAACGAAGGC
Suggested primer 2:TGTTTCGGCCCCCTATAGGA