Insertion junction: CLIP2.068840_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068840
Chromosome:chromosome 13
Location:1918483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575950 HIRA1,HIR1 (1 of 1) K11293 - protein HIRA/HIR1 (HIRA, HIR1); Histone transcription regulator 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGAGCCTTGTTGGCAGATGTTGAAACTGTGCGGAGGCAGCTGCAATC
Internal bar code:AAGCAAGTTCGTTGGAGCCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGAGGGGAAGAAATGGG
Suggested primer 2:AACGCAACAATCACACCGTG