Insertion junction: CLIP2.068840_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068840
Chromosome:chromosome 13
Location:1918570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575950 HIRA1,HIR1 (1 of 1) K11293 - protein HIRA/HIR1 (HIRA, HIR1); Histone transcription regulator 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACGCAGCGCTGTCACAACTCACAAACGTGCGCCTCTGCACCTTTACA
Internal bar code:CTTAATTAGGAATATTCTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4134
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:150
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:150

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCAACAATCACACCGTG
Suggested primer 2:GTGGGAGGGGAAGAAATGGG