Insertion junction: CLIP2.068841_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068841
Chromosome:chromosome 5
Location:2804175
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g241150 (1 of 1) K11491 - condensin-2 complex subunit D3 (NCAPD3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAGACGCGGGCGGATGGAGGAGCCAAGCAGGTGGCCAGGCGGAAAGG
Internal bar code:TGATTCGGAATCACCTATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:236
LEAP-Seq percent confirming:29.6296
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGGGTTCCGGATCAAT
Suggested primer 2:GTGGTGGTGGTTGTAGGGAG