Insertion junction: CLIP2.068846_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068846
Chromosome:chromosome 16
Location:2439101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660050 CMT1B (1 of 2) PTHR12608//PTHR12608:SF7 - TRANSMEMBRANE PROTEIN HTP-1 RELATED // GDT1-LIKE PROTEIN 2, CHLOROPLASTIC; Mn and/or Ca transport 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGCAACAGTTGTGGATGTGATGATTGCGGGCGGTTGCGGAATGCTG
Internal bar code:TTGCTTGGGATTTGAGTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1389
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TAACTGGGGACTCGGGCATA
Suggested primer 2:AAGTATGCACCTTCCCAGCC