Insertion junction: CLIP2.068846_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068846
Chromosome:chromosome 16
Location:2439109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660050 CMT1B (1 of 2) PTHR12608//PTHR12608:SF7 - TRANSMEMBRANE PROTEIN HTP-1 RELATED // GDT1-LIKE PROTEIN 2, CHLOROPLASTIC; Mn and/or Ca transport 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAATGCCTTCCGCGACAACCTCAACATCGCAAAAATTGGATCAAAAA
Internal bar code:GCCGGAGCCCGTTTTGTAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2725
LEAP-Seq percent confirming:98.8764
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTATGCACCTTCCCAGCC
Suggested primer 2:TAACTGGGGACTCGGGCATA