Insertion junction: CLIP2.068850_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068850
Chromosome:chromosome 10
Location:4833049
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g453300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCATTCGTGTGCGCCGCCCATGCCGGCGCCGGCATTCGTGTGCTGCA
Internal bar code:TTGGGAATATAGCAGTAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCTTTGCATCGGCCTTG
Suggested primer 2:AGGGCTCCTTTGCGTACATC